Table 4

Schematic representation of HRD score evaluated by each participating institution by using commercially available NGS assays on a retrospective series of diagnostic HGSOC specimens

Sample IDCentre #1Centre #2Centre #3
Illumina NextSeq 550DxIllumina HiSeq 2500Ion Gene Studio S5 Plus SystemIllumina NextSeq 550 platform
SOPHiA DDM HRD solution panelMyChoice CDx Myriad HRDOncomine HRR pathway panelAmoy HRD focus panel
ID_1POSNEGPOS*POS
ID_2POSPOSNEGPOS
ID_3POSPOSPOSPOS
ID_4NEGPOSPOSPOS
ID_5NEGNEGNEGNEG
ID_6NEGNEGNEGNEG
ID_7NEGNEGNEGNEG
ID_8NEGNEGNEGNEG
ID_9NEGNEGNEGNEG
ID_10NEGNEGNEGNA
ID_11POSPOSNEGNA
ID_12NEGNEGNEGNEG
ID_13POSPOSNEGPOS
ID_14NEGNEGNEGNEG
ID_15NEGNEGNEGNEG
ID_16POSPOSPOSPOS
ID_17NEGNEGNEGPOS*
ID_18NEGNEGNEGNA
ID_19POSPOSPOSPOS
ID_20NEGNEGNEGNEG
  • *Borderline results.

  • HRD, homologous recombination deficiency; HRR, homologous recombination repair; ID, identify number; NA, not assessed; NEG, negative; NGS, next-generation sequencing; POS, positive.